STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61145.1Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: plm:Plim_0030 protein of unknown function DUF164; PFAM: Protein of unknown function DUF164; SPTR: Probable phospholipase C-beta-2; PFAM: Putative zinc ribbon domain. (232 aa)    
Predicted Functional Partners:
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
     0.568
rnhA
RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.534
ADY57662.1
InterPro IPR002541; KEGG: plm:Plim_1297 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein.
  
     0.520
ADY57719.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184: IPR016474; KEGG: plm:Plim_2365 outer membrane protein assembly complex, YaeT protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
     0.498
ADY59174.1
InterPro IPR011467; KEGG: plm:Plim_3670 protein of unknown function DUF1573; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573).
  
     0.473
ADY61147.1
UDP-N-acetylglucosamine diphosphorylase; COGs: COG4284 UDP-glucose pyrophosphorylase; InterPro IPR002618; KEGG: rba:RB6977 UDP-N-acetylhexosamine pyrophosphorylase; PFAM: UTP--glucose-1-phosphate uridylyltransferase; PRIAM: UDP-N-acetylglucosamine diphosphorylase; SPTR: UDP-N-acetylhexosamine pyrophosphorylase; PFAM: UTP--glucose-1-phosphate uridylyltransferase.
 
     0.463
ADY61146.1
KEGG: hut:Huta_1856 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.458
ADY61144.1
Metallophosphoesterase; InterPro IPR004843; KEGG: plm:Plim_0868 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.
       0.427
ADY62015.1
Alpha-amylase; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300: IPR015178: IPR015179; KEGG: psl:Psta_3212 4-alpha-glucanotransferase; PFAM: Alpha-amylase/4-alpha-glucanotransferase, prokaryotic; Glycoside hydrolase, family 57, core; Domain of unknown function DUF1925; PRIAM: 4-alpha-glucanotransferase; SPTR: Alpha-amylase; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).
  
     0.415
ADY58272.1
Domain of unknown function DUF1844; InterPro IPR014995; KEGG: rba:RB12060 hypothetical protein; PFAM: Protein of unknown function DUF1844; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1844).
  
     0.410
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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