STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61151.1Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: plm:Plim_3669 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Membrane protein involved in the export of O-antigen and teichoic acid-like protein; PFAM: Polysaccharide biosynthesis protein. (501 aa)    
Predicted Functional Partners:
ADY61152.1
COGs: COG5653 Protein involved in cellulose biosynthesis (CelD); KEGG: plm:Plim_3884 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.880
ADY60364.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509: IPR005888; KEGG: drt:Dret_0307 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.805
ADY59213.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.804
ADY58161.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.803
ADY59227.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR020019: IPR003362: IPR001451; KEGG: ngk:NGK_0123 PglB; PFAM: Bacterial sugar transferase; Bacterial transferase hexapeptide repeat; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD; PFAM: Bacterial sugar transferase; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
  
 0.794
ADY61153.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: plm:Plim_3883 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
 
    0.774
ADY61155.1
Glycosyltransferase-like protein; COGs: COG0438 Glycosyltransferase; KEGG: plm:Plim_3878 glycosyltransferase-like protein; SPTR: TPR/glycosyl transferase domain protein.
 
    0.754
ADY62016.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: plm:Plim_3874 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.730
ADY61150.1
KEGG: plm:Plim_3885 O-antigen polymerase; SPTR: O-antigen polymerase family protein.
  
  
 0.723
ADY60365.1
Nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: plm:Plim_3736 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UD [...]
  
  
 0.703
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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