STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61169.1UPF0178 protein yaiI; COGs: COG1671 conserved hypothetical protein; HAMAP: Protein of unknown function DUF188; InterPro IPR003791; KEGG: amr:AM1_1179 YaiI/YqxD family protein; PFAM: Protein of unknown function DUF188; SPTR: UPF0178 protein PM8797T_13735; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; Belongs to the UPF0178 family. (149 aa)    
Predicted Functional Partners:
ADY61170.1
COGs: COG3247 conserved hypothetical protein; KEGG: nmg:Nmag_2690 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.719
ADY61171.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.609
ADY61167.1
InterPro IPR008407; KEGG: dac:Daci_3748 branched-chain amino acid transport; PFAM: Branched-chain amino acid transport; SPTR: Branched-chain amino acid transport; PFAM: Branched-chain amino acid transport protein (AzlD).
       0.466
ADY61168.1
AzlC family protein; COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: sno:Snov_2352 AzlC family protein; PFAM: AzlC-like; SPTR: Putative branched-chain amino acid transport protein AzlC; PFAM: AzlC protein.
       0.466
ADY61172.1
KEGG: rba:RB8085 PQQ repeat-containing protein; SPTR: Putative uncharacterized protein.
       0.409
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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