STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61295.1Peptidase C14 caspase catalytic subunit p20; InterPro IPR011600; KEGG: mlo:mlr3300 hypothetical protein; PFAM: Peptidase C14, caspase catalytic; SPTR: Mlr3300 protein; PFAM: Caspase domain. (741 aa)    
Predicted Functional Partners:
ADY61304.1
Peptidase C14 caspase catalytic subunit p20; COGs: COG4249 Uncharacterized protein containing caspase domain; InterPro IPR011600; KEGG: gvi:glr2244 WD repeat-containing protein; PFAM: Peptidase C14, caspase catalytic; SPTR: WD-repeat protein; PFAM: Caspase domain.
 
   
 0.725
ADY59332.1
KEGG: psl:Psta_0862 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family.
  
     0.625
ADY61294.1
KEGG: tel:tlr2085 hypothetical protein.
       0.608
ADY59380.1
3'(2'),5'-bisphosphate nucleotidase; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006239: IPR000760; KEGG: rmr:Rmar_2420 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase HAL2; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, HAL2 family.
  
     0.567
ADY61143.1
KEGG: hoh:Hoch_2099 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.530
ADY59373.1
KEGG: plm:Plim_3997 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GTPase of unknown function.
 
     0.461
ADY60667.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR013656: IPR003661: IPR003594: IPR000014: IPR 001610; KEGG: rba:RB3615 sensor protein AtoS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS; SPTR: Sensor protein atoS; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kin [...]
  
     0.456
ADY61255.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: psl:Psta_3530 planctomycete cytochrome c; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
 
 
   0.438
ADY61296.1
Hypothetical protein; KEGG: sro:Sros_6227 WD40 repeat-domain-containing protein-like protein; SPTR: WD40 repeat-domain-containing protein-like protein.
       0.434
ADY61491.1
COGs: COG1538 Outer membrane protein; KEGG: rba:RB183 putative outer membrane protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
 
   0.427
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.