STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61329.1Peptidase M1 membrane alanine aminopeptidase; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: plm:Plim_1781 putative Zn-dependent aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Putative Zn-dependent aminopeptidase; PFAM: Peptidase family M1. (788 aa)    
Predicted Functional Partners:
ADY61123.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR001478: IPR003137: IPR007484; KEGG: plm:Plim_3899 peptidase M28; PFAM: Peptidase M28; Protease-associated PA; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Peptidase M28; PFAM: PA domain; PDZ domain (Also known as DHR or GLGF); Peptidase family M28.
 
 
 
 0.726
ADY58869.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: psl:Psta_3400 peptidase M28; PFAM: Peptidase M28; SPTR: PDZ domain (Also known as DHR or GLGF); PFAM: Peptidase family M28.
 
 
 
 0.690
ADY61115.1
Peptidase M28; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR001478: IPR011659: IPR007484; KEGG: rba:RB6120 TolB protein; PFAM: Peptidase M28; WD40-like Beta Propeller; SMART: PDZ/DHR/GLGF; SPTR: Probable TolB protein; PFAM: PA domain; WD40-like Beta Propeller Repeat; Peptidase family M28.
 
 
 
 0.640
ADY60562.1
Beta-aspartyl-peptidase; COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: rba:RB7985 L-asparaginase; PFAM: Peptidase T2, asparaginase 2; PRIAM: Beta-aspartyl-peptidase; SPTR: L-asparaginase; PFAM: Asparaginase.
  
     0.567
ADY59267.1
COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR004540: IPR005225: IPR000795: IPR004161: IPR 005517: IPR000640; KEGG: plm:Plim_0475 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP bin [...]
   
 
 0.545
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
   
 
 0.545
ADY61330.1
Proteinase inhibitor I4 serpin; COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: dtu:Dtur_1669 non-specific serine/threonine protein kinase; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; SPTR: Proteinase inhibitor I4 serpin; PFAM: Serpin (serine protease inhibitor); Belongs to the serpin family.
   
 0.545
ADY60703.1
InterPro IPR000834; KEGG: plm:Plim_0309 peptidase M14, carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase.
 
   
 0.530
ADY61963.1
Xenobiotic-transporting ATPase; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; KEGG: psl:Psta_2756 ABC transporter related protein; PRIAM: Xenobiotic-transporting ATPase; SPTR: Probable toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter transmembrane region.
 
     0.510
ADY59247.1
Protein of unknown function DUF885; COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: plm:Plim_0588 prolyl oligopeptidase; PFAM: Protein of unknown function DUF885, bacterial; SPTR: Prolyl oligopeptidase; PFAM: Bacterial protein of unknown function (DUF885).
  
     0.498
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.