STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61338.1Hypothetical protein; COGs: COG1520 FOG: WD40-like repeat; KEGG: rba:RB13048 hypothetical protein; SPTR: Putative uncharacterized protein. (534 aa)    
Predicted Functional Partners:
ADY57749.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372: IPR018391; KEGG: psl:Psta_1741 FOG: WD40 repeat-like protein; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Pyrrolo-quinoline quinone.
  
     0.774
ADY59551.1
KEGG: psl:Psta_0754 pyrrolo-quinoline quinone; SPTR: Putative uncharacterized protein.
  
     0.774
ADY58953.1
KEGG: plm:Plim_3329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
ADY59906.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: plm:Plim_0100 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
  
     0.770
ADY57644.1
KEGG: plm:Plim_3312 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase.
  
     0.769
ADY58124.1
KEGG: plm:Plim_4007 hypothetical protein; SPTR: Probable alcohol dehydrogenase (Acceptor).
  
     0.769
ADY59018.1
KEGG: plm:Plim_1978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
ADY62207.1
Protein of unknown function DUF116; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR002829: IPR000092; KEGG: plm:Plim_2915 protein of unknown function DUF116; PFAM: Protein of unknown function DUF116; Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Protein of unknown function DUF116.
  
     0.764
ADY57653.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: plm:Plim_3326 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Aldehyde dehydrogenase family.
  
     0.752
ADY57643.1
COGs: COG1657 Squalene cyclase; InterPro IPR001330; KEGG: plm:Plim_0903 squalene cyclase-like protein; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Probable squalene-hopene cyclase; PFAM: Pectic acid lyase; TIGRFAM: squalene/oxidosqualene cyclases.
  
     0.728
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.