STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61369.1KEGG: gvi:glr1689 hypothetical protein; SPTR: Glr1689 protein. (419 aa)    
Predicted Functional Partners:
ADY61368.1
Hypothetical protein.
       0.773
ADY61370.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR018248: IPR002048; KEGG: gvi:glr3508 hypothetical protein; PFAM: Beta-lactamase-related; EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand; SPTR: Glr3508 protein; PFAM: Beta-lactamase.
       0.664
ADY61367.1
Arylsulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_1326 sulfatase; PFAM: Sulfatase; PRIAM: Arylsulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
       0.580
ADY61255.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: psl:Psta_3530 planctomycete cytochrome c; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
  
     0.447
ADY59804.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019781; KEGG: rba:RB617 WD-40 repeat-containing regulatory protein; PFAM: WD40 repeat, subgroup; SPTR: Probable WD-40 repeat regulatory protein; PFAM: WD domain, G-beta repeat.
  
     0.435
ADY61371.1
Redoxin domain protein; InterPro IPR013740; KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin; SPTR: Putative signal transduction protein with EFhand domain; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin.
       0.429
ADY60246.1
KEGG: psl:Psta_0787 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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