STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61397.1Peptidase M50; InterPro IPR008915; KEGG: psl:Psta_2183 peptidase M50; PFAM: Peptidase M50; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M50. (734 aa)    
Predicted Functional Partners:
ADY61398.1
GAF domain protein; InterPro IPR003018; KEGG: psl:Psta_2185 putative phytochrome sensor protein; PFAM: GAF; SMART: GAF; SPTR: Putative uncharacterized protein.
 
     0.886
ADY62309.1
GAF domain protein; InterPro IPR003018; KEGG: rba:RB10473 alkaline protease secretion protein AprE; PFAM: GAF; SMART: GAF; SPTR: Putative uncharacterized protein.
  
     0.772
ADY61400.1
InterPro IPR000089; KEGG: plm:Plim_3437 secretion protein HlyD family protein; PFAM: Biotin/lipoyl attachment; SPTR: Probable multidrug efflux pump.
 
     0.678
ADY62011.1
KEGG: psl:Psta_0856 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
  
     0.675
ADY62307.1
InterPro IPR000089; KEGG: psl:Psta_1800 secretion protein HlyD family protein; PFAM: Biotin/lipoyl attachment; SPTR: Probable multidrug efflux pump.
 
     0.525
ADY59578.1
COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2805 outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
   0.522
secA-2
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
      0.518
ADY61396.1
KEGG: rba:RB10957 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain.
  
    0.492
ADY61612.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: plm:Plim_0090 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
   0.451
ADY59906.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: plm:Plim_0100 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
   
   0.403
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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