STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61403.1KEGG: rba:RB6463 hypothetical protein; SPTR: Putative uncharacterized protein. (212 aa)    
Predicted Functional Partners:
ADY61402.1
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: rba:RB11981 ABC transporter substrate-binding protein; PFAM: Periplasmic binding protein; SPTR: Probable ABC transporter (Substrate-binding protein); PFAM: Periplasmic binding protein.
 
     0.634
ADY61401.1
Protein of unknown function DUF71 ATP-binding region; COGs: COG2102 ATPase of PP-loop superfamily; InterPro IPR002761; KEGG: aba:Acid345_3648 protein of unknown function DUF71, ATPase; PFAM: Protein of unknown function DUF71, ATP-binding domain; SPTR: Putative uncharacterized protein; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain.
 
     0.630
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.