STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61498.1D-arabinose 1-dehydrogenase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: rba:RB203 oxidoreductase; PFAM: Aldo/keto reductase; PRIAM: D-arabinose 1-dehydrogenase; SPTR: Putative oxidoreductase-possibly Aldo/keto reductase; PFAM: Aldo/keto reductase family. (316 aa)    
Predicted Functional Partners:
ADY61497.1
Membrane-bound dehydrogenase domain protein; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR004155: IPR000923: IPR003088: IPR013428: IPR 013427; KEGG: rba:RB2605 azurin precursor; PFAM: Blue (type 1) copper domain; PBS lyase HEAT-like repeat; Cytochrome c, class I; SPTR: Similar to azurin; TIGRFAM: Putative membrane-bound dehydrogenase; Haem-binding domain, putative; PFAM: Cytochrome c; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
    0.776
ADY61499.1
L-iditol 2-dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: psl:Psta_0941 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; PRIAM: L-iditol 2-dehydrogenase; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
    0.680
ADY61501.1
KEGG: plm:Plim_1355 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.619
ADY61503.1
Amidohydrolase 2; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: psl:Psta_0937 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
    0.618
ADY61500.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB201 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
     0.578
ADY59586.1
RbsD or FucU transport; COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: plm:Plim_1645 RbsD or FucU transport; PFAM: RbsD/FucU transport; SPTR: RbsD or FucU transport; PFAM: RbsD / FucU transport protein family; Belongs to the RbsD / FucU family.
 
     0.554
ADY60437.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: pat:Patl_2877 aldehyde reductase; PFAM: Aldo/keto reductase; PRIAM: Aldehyde reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
 
 
 0.546
ADY61496.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: rba:RB3549 lactose operon transcription activator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
 
     0.499
ADY60522.1
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: psl:Psta_1777 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
  
     0.448
ADY61502.1
3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: rba:RB8728 D-mannonate oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative oxidoreductase; PFAM: short chain dehydrogenase.
       0.416
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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