STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61502.13-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: rba:RB8728 D-mannonate oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative oxidoreductase; PFAM: short chain dehydrogenase. (270 aa)    
Predicted Functional Partners:
ADY61501.1
KEGG: plm:Plim_1355 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.839
ADY59040.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: psl:Psta_1052 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
  
     0.765
ADY61500.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB201 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
       0.746
ADY61437.1
3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: ade:Adeh_1207 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Carbonyl reductase [NADPH] 1 (Nadph-dependent carbonylreductase 1) (20-beta-hydroxysteroid dehydrogenase) (Prostaglandin-e(2) 9-reductase); PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.741
ADY61503.1
Amidohydrolase 2; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: psl:Psta_0937 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
  
    0.680
ADY61504.1
KEGG: rba:RB4015 signal peptide; SPTR: Putative uncharacterized protein.
  
   0.674
ADY58337.1
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: rba:RB3632 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative uncharacterized protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.629
ADY61505.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB12431 sulfatase; PFAM: Sulfatase; SPTR: Probable sulfatase; PFAM: Sulfatase.
  
   0.581
ADY58001.1
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: amr:AM1_3131 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative uncharacterized protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.572
ADY61499.1
L-iditol 2-dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: psl:Psta_0941 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; PRIAM: L-iditol 2-dehydrogenase; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
    0.566
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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