STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61580.1Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: plm:Plim_2347 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin. (505 aa)    
Predicted Functional Partners:
ADY59212.1
PDZ/DHR/GLGF domain protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001254; KEGG: psl:Psta_3927 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; SPTR: Probable serine protease DO-like protein; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).
  
     0.775
ADY62253.1
PDZ/DHR/GLGF domain protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478; KEGG: plm:Plim_1811 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.775
ADY62273.1
PDZ/DHR/GLGF domain protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478; KEGG: plm:Plim_1810 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Serine proteinase, HtrA/DegQ/DegS family; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.770
ADY61297.1
Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: amr:AM1_6328 trypsin-like serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Bacterial pre-peptidase C-terminal domain family; PFAM: Trypsin.
  
     0.711
ADY58113.1
COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: dgr:Dgri_GH21813 GH21813 gene product from transcript GH21813-RA; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.
  
 
 0.467
ADY61581.1
Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: psl:Psta_4766 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Putative uncharacterized protein; PFAM: Sodium Bile acid symporter family.
       0.437
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.