STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61589.1KEGG: plm:Plim_0020 hypothetical protein; SPTR: Putative uncharacterized protein. (107 aa)    
Predicted Functional Partners:
ADY59135.1
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592: IPR013974; KEGG: plm:Plim_0795 Flp pilus assembly protein CpaB; PFAM: SAF domain; SPTR: Flp pilus assembly CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; TIGRFAM: Flp pilus assembly protein CpaB.
  
  
 0.464
ADY62261.1
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR013974: IPR017592; KEGG: plm:Plim_1817 Flp pilus assembly protein CpaB; PFAM: SAF domain; SPTR: Putative uncharacterized protein; TIGRFAM: Pilus assembly, Flp-type CpaB; TIGRFAM: Flp pilus assembly protein CpaB.
  
  
 0.464
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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