STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61653.1COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: plm:Plim_1753 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; PFAM: Ethanolamine utilisation protein EutN/carboxysome. (105 aa)    
Predicted Functional Partners:
ADY61651.1
Microcompartments protein; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: plm:Plim_1755 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein; PFAM: BMC domain.
 
 
 
 0.963
ADY61650.1
Microcompartments protein; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: plm:Plim_1756 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Probable ethanolamine utilization protein EutM; PFAM: BMC domain.
 
 
 
 0.952
ADY61655.1
Acetaldehyde dehydrogenase (acetylating); COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: plm:Plim_1751 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family.
 
   
 0.895
ADY61657.1
COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: plm:Plim_1750 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Ethanolamine utilization protein EutN-like; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
 
     0.876
ADY61649.1
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
   
 0.809
ADY61654.1
KEGG: plm:Plim_1752 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.790
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.752
ADY61659.1
InterPro IPR004992; KEGG: plm:Plim_1748 hypothetical protein; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Putative uncharacterized protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
       0.426
ADY61656.1
KEGG: fsu:Fisuc_2636 S23 ribosomal protein; SPTR: S23 ribosomal protein; PFAM: S23 ribosomal protein.
       0.414
ADY61660.1
L-fuculose-phosphate aldolase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: plm:Plim_1747 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-fuculose-phosphate aldolase; SPTR: L-fuculose-phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
     0.401
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.