STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61676.1Resolvase domain protein; InterPro IPR006119; KEGG: ade:Adeh_2336 recombinase; PFAM: Resolvase, N-terminal; SPTR: Site-specific recombinase and resolvase superfamily protein; PFAM: Resolvase, N terminal domain. (684 aa)    
Predicted Functional Partners:
ADY58473.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: rba:RB3871 transposase; PFAM: Transposase, IS4-like; SPTR: Probable transposase; PFAM: Transposase DDE domain.
  
     0.756
ADY58388.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: rba:RB3871 transposase; PFAM: Transposase, IS4-like; SPTR: Probable transposase; PFAM: Transposase DDE domain.
  
     0.754
ADY58650.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: rba:RB3871 transposase; PFAM: Transposase, IS4-like; SPTR: Probable transposase; PFAM: Transposase DDE domain.
  
     0.754
ADY59976.1
COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR000014: IPR001610: IPR003018: IPR003661: IPR 003594: IPR001789: IPR013767: IPR013655: IPR013656; KEGG: rba:RB641 sensory histidine protein kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS; PAC motif; Signal [...]
  
     0.740
ADY60300.1
KEGG: mac:MA0515 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
ADY60714.1
Hypothetical protein; InterPro IPR012902; KEGG: plm:Plim_2092 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.698
ADY60576.1
FecR protein; InterPro IPR006558: IPR006860; KEGG: psl:Psta_1166 FecR protein; PFAM: FecR protein; SMART: LamG-like jellyroll fold; SPTR: Putative uncharacterized protein; PFAM: FecR protein.
  
     0.685
ADY61241.1
Integrase family protein; InterPro IPR002104; KEGG: tdn:Suden_0959 phage integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
    0.662
ADY60238.1
Hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: psl:Psta_1651 hypothetical protein; SPTR: Probable sialidase; PFAM: Acetyl xylan esterase (AXE1).
  
     0.651
ADY59332.1
KEGG: psl:Psta_0862 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family.
  
     0.633
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.