STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61775.1O-antigen polymerase; InterPro IPR007016; KEGG: rba:RB1691 signal peptide; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase. (862 aa)    
Predicted Functional Partners:
ADY61780.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: plm:Plim_3874 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.720
ADY59403.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: plm:Plim_4112 polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
  
 0.620
ADY59402.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: plm:Plim_4111 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.615
ADY62016.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: plm:Plim_3874 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.592
ADY59924.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: plm:Plim_4167 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.506
ADY61774.1
KEGG: vvi:100250396 hypothetical protein LOC100250396; SPTR: Peptidoglycan-binding domain 1 protein.
       0.501
ADY61776.1
Glycosyl transferase, family 4, conserved region-containing protein; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: rba:RB6472 putative undecaprenyl-phosphate N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Putative undecaprenyl-phosphate N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase family 4.
 
   
 0.496
ADY59227.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR020019: IPR003362: IPR001451; KEGG: ngk:NGK_0123 PglB; PFAM: Bacterial sugar transferase; Bacterial transferase hexapeptide repeat; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD; PFAM: Bacterial sugar transferase; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
  
 0.461
ADY61777.1
NGN domain-containing protein; InterPro IPR006645; KEGG: rba:RB1900 NusG-like protein-putative transcription activator; PFAM: Transcription antitermination protein, NusG, N-terminal; SPTR: Probable NusG-like protein-putative transcription activator; PFAM: Transcription termination factor nusG.
 
   
 0.408
ADY61771.1
KEGG: rba:RB6480 polysaccharide biosynthesis protein; SPTR: Similar to polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis/export protein.
  
  
 0.403
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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