STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61822.1Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rba:RB11033 putative ABC transporter integral membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative ABC transporter integral membrane protein; PFAM: Predicted permease. (980 aa)    
Predicted Functional Partners:
ADY61821.1
Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB11030 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transport system ATP binding protein; PFAM: ABC transporter.
 
 
 0.923
ADY61823.1
Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB11030 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
 
 0.883
ADY61523.1
Laminin G sub domain 2; InterPro IPR012680: IPR001791: IPR006558; KEGG: rba:RB10999 cycloinulo-oligosaccharide fructanotransferase; PFAM: Laminin G, subdomain 2; SMART: LamG-like jellyroll fold; Laminin G; SPTR: Probable cycloinulo-oligosaccharide fructanotransferase; PFAM: Laminin G domain.
  
     0.769
ADY60812.1
FecR protein; InterPro IPR006860: IPR006558; KEGG: rba:RB5421 cycloinulo-oligosaccharide fructanotransferase; PFAM: FecR protein; SMART: LamG-like jellyroll fold; SPTR: Similar to cycloinulo-oligosaccharide fructanotransferase; PFAM: FecR protein.
  
     0.756
ADY57893.1
Pectic acid lyase; InterPro IPR012669; KEGG: psl:Psta_1281 hypothetical protein; PFAM: Pectic acid lyase; SPTR: Putative uncharacterized protein; PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
  
     0.747
ADY61886.1
KEGG: rba:RB12630 signal peptide; SPTR: Putative uncharacterized protein.
  
     0.745
ADY58999.1
InterPro IPR013148: IPR001362; KEGG: rba:RB5832 hypothetical protein; PFAM: Glycosyl hydrolases family 32, N-terminal; SMART: Glycoside hydrolase, family 32; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 32 N-terminal domain.
  
     0.744
ADY60677.1
Protein of unknown function DUF1588; InterPro IPR013039; KEGG: rba:RB3034 signal peptide; PFAM: Protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Planctomycete cytochrome C.
  
     0.739
ADY61491.1
COGs: COG1538 Outer membrane protein; KEGG: rba:RB183 putative outer membrane protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
 
 
 0.732
ADY61882.1
KEGG: rba:RB5008 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.723
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.