STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61831.1Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: plm:Plim_1958 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (301 aa)    
Predicted Functional Partners:
ADY61830.1
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: Protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
       0.773
ADY61803.1
Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: rba:RB8796 GntR family transcription regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Probable gntR-family transcription regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.663
ADY60673.1
Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: aar:Acear_0060 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; SPTR: Putative uncharacterized protein; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
  
 0.646
ADY61834.1
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: bcv:Bcav_2975 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Putative uncharacterized protein; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
     0.643
ADY61835.1
Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: ote:Oter_2672 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: General substrate transporter:Major facilitator superfamily protein; PFAM: Major Facilitator Superfamily.
 
     0.638
ADY61833.1
KEGG: dfe:Dfer_5254 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
     0.633
ADY61832.1
Galactonate dehydratase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341: IPR013342; KEGG: dfe:Dfer_5256 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; PRIAM: Galactonate dehydratase; SPTR: 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
  
  
 0.572
ADY61829.1
Protein of unknown function DUF1501; InterPro IPR010869; KEGG: rba:RB12566 sulfatase; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
       0.565
ADY60641.1
KEGG: rba:RB11249 acyl-CoA thioesterase I; SPTR: Acyl-CoA thioesterase I-like protein.
  
     0.550
ADY61086.1
COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912: IPR019455: IPR004789; KEGG: plm:Plim_1192 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.
   
    0.532
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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