STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61852.1KEGG: plm:Plim_0034 biotin apo-protein ligase-related protein; SPTR: Biotin apo-protein ligase-related protein-like; PFAM: Biotin-protein ligase, N terminal. (272 aa)    
Predicted Functional Partners:
ADY61824.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rba:RB11027 ABC transporter membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Probable ABC transport system integral membrane protein; PFAM: Predicted permease.
  
     0.680
ADY59025.1
KEGG: rba:RB11055 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BNR/Asp-box repeat.
  
     0.661
ADY60497.1
InterPro IPR011444; KEGG: psl:Psta_0348 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.658
ADY61620.1
Hypothetical protein; InterPro IPR001343; KEGG: plm:Plim_0574 hemagluttinin repeat-containing protein; SPTR: Hemagluttinin repeat-containing protein.
  
     0.657
ADY61853.1
KEGG: plm:Plim_0034 biotin apo-protein ligase-related protein; SPTR: Biotin apo-protein ligase-related protein-like; PFAM: Biotin-protein ligase, N terminal.
 
    
0.652
ADY61064.1
Hpt domain protein; InterPro IPR008207; KEGG: plm:Plim_2510 Hpt domain protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: Putative uncharacterized protein; PFAM: Hpt domain.
  
     0.649
ADY59277.1
KEGG: plm:Plim_0655 pericardin like protein; SPTR: Pericardin like protein.
  
     0.638
ADY59566.1
Hypothetical protein; InterPro IPR012902; KEGG: plm:Plim_2888 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.628
ADY60641.1
KEGG: rba:RB11249 acyl-CoA thioesterase I; SPTR: Acyl-CoA thioesterase I-like protein.
  
     0.628
ADY61851.1
InterPro IPR005079; KEGG: plm:Plim_0017 hypothetical protein; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Putative uncharacterized protein; PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
      0.626
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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