STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61863.1KEGG: psl:Psta_0328 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial Ig-like domain (group 1). (126 aa)    
Predicted Functional Partners:
ADY61864.1
Hypothetical protein; InterPro IPR012902; KEGG: plm:Plim_3621 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.480
ADY61862.1
Membrane-bound dehydrogenase domain protein; COGs: COG3828 conserved hypothetical protein; InterPro IPR013428: IPR013427: IPR003088; KEGG: rba:RB524 secreted glycosyl hydrolase; PFAM: Cytochrome c, class I; SPTR: Probable secreted glycosyl hydrolase; TIGRFAM: Putative membrane-bound dehydrogenase; Haem-binding domain, putative; PFAM: Cytochrome c; Trehalose utilisation; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
       0.448
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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