STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61953.1KEGG: plm:Plim_2834 hypothetical protein; SPTR: Putative uncharacterized protein. (343 aa)    
Predicted Functional Partners:
ADY61952.1
InterPro IPR011743; KEGG: plm:Plim_2953 caa(3)-type oxidase, subunit IV; SPTR: Caa(3)-type oxidase, subunit IV; TIGRFAM: Caa(3)-type oxidase, subunit IV; TIGRFAM: caa(3)-type oxidase, subunit IV.
       0.491
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.423
ADY61950.1
KEGG: plm:Plim_0307 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.411
ADY61951.1
Protein of unknown function DUF420; COGs: COG2322 membrane protein; InterPro IPR003782: IPR007352; KEGG: plm:Plim_0216 protein of unknown function DUF420; PFAM: Protein of unknown function DUF420; Copper chaperone SCO1/SenC; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420); SCO1/SenC.
       0.411
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.