STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY61977.1COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: plm:Plim_1300 glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; SPTR: Glutamine cyclotransferase; PFAM: Glutamine cyclotransferase. (274 aa)    
Predicted Functional Partners:
ADY61976.1
TatD-related deoxyribonuclease; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: cyc:PCC7424_2285 TatD-related deoxyribonuclease; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative uncharacterized protein; PFAM: TatD related DNase.
       0.655
ADY61978.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: psl:Psta_0967 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable TolQ-type transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
       0.628
ADY61979.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: psl:Psta_0966 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Probable Biopolymer transport exbD protein; PFAM: Biopolymer transport protein ExbD/TolR.
       0.628
ADY61980.1
InterPro IPR003400; KEGG: psl:Psta_0965 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR.
       0.596
ADY61981.1
Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR015991: IPR001130; KEGG: plm:Plim_3632 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative deoxyribonuclease yabD; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
  
    0.441
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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