STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM00027.1Uncharacterized membrane-bound protein conserved in bacteria; PFAM: Protein of unknown function (DUF1129). (218 aa)    
Predicted Functional Partners:
AFM00026.1
PFAM: Transcriptional regulator PadR-like family.
 
  
 0.904
AFM02308.1
Hypothetical protein.
  
     0.740
AFM00199.1
Hypothetical protein.
  
     0.688
AFM01784.1
PFAM: Flagellar hook-length control protein FliK.
  
     0.610
AFM01656.1
Putative transcriptional regulator; PFAM: MerR family regulatory protein.
  
     0.580
AFM00149.1
PFAM: Transcriptional regulator PadR-like family.
 
  
 0.571
AFM01260.1
PFAM: Fimbrial assembly protein (PilN).
  
     0.569
AFM02081.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.557
AFM01941.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Cna protein B-type domain; Bacterial Ig-like domain (group 1).
  
     0.538
AFM02349.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
  
     0.532
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.