STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM00761.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AFM00760.1
Hypothetical protein.
   
   0.840
AFM00759.1
Hypothetical protein.
       0.773
AFM00214.1
PFAM: Protein of unknown function (DUF2680).
   
    0.532
AFL99139.1
Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family.
  
    0.445
AFL99508.1
PFAM: Terminase-like family; TIGRFAM: phage terminase, large subunit, PBSX family.
  
    0.419
AFL98798.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   0.402
AFM01928.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; manually curated.
  
   0.402
AFM02059.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  
   0.402
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.