STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM01746.1Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain. (707 aa)    
Predicted Functional Partners:
glk
PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.908
AFM02304.1
Cell wall-binding protein; PFAM: Bacterial Ig-like domain (group 2); Putative cell wall binding repeat 2.
 
  
 0.824
AFM02118.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
    0.817
AFM02134.1
Cell wall-binding protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2.
  
    0.805
AFL99685.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
    0.794
AFM00809.1
Uncharacterized enzyme of heme biosynthesis; PFAM: Uncharacterized protein conserved in bacteria (DUF2225); Tetratricopeptide repeat.
  
   
 0.794
AFM01941.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Cna protein B-type domain; Bacterial Ig-like domain (group 1).
  
    0.794
AFM02120.1
PFAM: Putative cell wall binding repeat 2; Glycosyl hydrolases family 18.
 
  
 0.794
AFM02300.1
ABC-type sugar transport system, periplasmic component.
 
   
 0.793
AFM02116.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Fibronectin type III domain.
 
    0.791
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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