STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM02324.1PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. (224 aa)    
Predicted Functional Partners:
AFM02323.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 0.998
AFM02325.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 0.998
AFM00221.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 0.975
AFM02173.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 0.965
AFL99403.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 
 0.923
AFM02171.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 
 0.920
AFL99073.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
 0.918
AFM02203.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 
 0.918
AFM00223.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 
 0.915
AFL99070.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein.
 
 
 0.816
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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