Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmaA | GCA_002139385_00490 | GCA_002139385_00494 | GCA_002139385_00490 | Unannotated protein. | Unannotated protein. | 0.781 |
AmaA | GCA_002139385_00492 | GCA_002139385_00494 | GCA_002139385_00492 | Unannotated protein. | Unannotated protein. | 0.781 |
AmaA | GCA_002139385_00496 | GCA_002139385_00494 | GCA_002139385_00496 | Unannotated protein. | Unannotated protein. | 0.782 |
AmaA | mlaE | GCA_002139385_00494 | GCA_002139385_00493 | Unannotated protein. | Unannotated protein. | 0.781 |
AmaA | panB_2 | GCA_002139385_00494 | GCA_002139385_00497 | Unannotated protein. | Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.802 |
AmaA | ruvB | GCA_002139385_00494 | GCA_002139385_00495 | Unannotated protein. | Unannotated protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.802 |
GCA_002139385_00490 | AmaA | GCA_002139385_00490 | GCA_002139385_00494 | Unannotated protein. | Unannotated protein. | 0.781 |
GCA_002139385_00490 | GCA_002139385_00492 | GCA_002139385_00490 | GCA_002139385_00492 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_002139385_00490 | GCA_002139385_00496 | GCA_002139385_00490 | GCA_002139385_00496 | Unannotated protein. | Unannotated protein. | 0.781 |
GCA_002139385_00490 | mlaE | GCA_002139385_00490 | GCA_002139385_00493 | Unannotated protein. | Unannotated protein. | 0.810 |
GCA_002139385_00490 | panB_2 | GCA_002139385_00490 | GCA_002139385_00497 | Unannotated protein. | Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.782 |
GCA_002139385_00490 | ruvB | GCA_002139385_00490 | GCA_002139385_00495 | Unannotated protein. | Unannotated protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.781 |
GCA_002139385_00492 | AmaA | GCA_002139385_00492 | GCA_002139385_00494 | Unannotated protein. | Unannotated protein. | 0.781 |
GCA_002139385_00492 | GCA_002139385_00490 | GCA_002139385_00492 | GCA_002139385_00490 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_002139385_00492 | GCA_002139385_00496 | GCA_002139385_00492 | GCA_002139385_00496 | Unannotated protein. | Unannotated protein. | 0.813 |
GCA_002139385_00492 | mlaE | GCA_002139385_00492 | GCA_002139385_00493 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_002139385_00492 | panB_2 | GCA_002139385_00492 | GCA_002139385_00497 | Unannotated protein. | Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.782 |
GCA_002139385_00492 | ruvB | GCA_002139385_00492 | GCA_002139385_00495 | Unannotated protein. | Unannotated protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.782 |
GCA_002139385_00496 | AmaA | GCA_002139385_00496 | GCA_002139385_00494 | Unannotated protein. | Unannotated protein. | 0.782 |
GCA_002139385_00496 | GCA_002139385_00490 | GCA_002139385_00496 | GCA_002139385_00490 | Unannotated protein. | Unannotated protein. | 0.781 |
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