STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002139385_00931Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_002139385_00937
Unannotated protein.
  
    0.827
GCA_002139385_00935
Unannotated protein.
  
    0.802
GCA_002139385_00929
Unannotated protein.
  
    0.795
GCA_002139385_00932
Unannotated protein.
  
    0.783
GCA_002139385_00938
Unannotated protein.
  
    0.782
GCA_002139385_00930
Unannotated protein.
  
    0.775
GCA_002139385_00927
Unannotated protein.
       0.773
GCA_002139385_00928
Unannotated protein.
       0.773
GCA_002139385_00936
Unannotated protein.
  
  
 0.751
GCA_002139385_00934
Unannotated protein.
  
  
 0.747
Your Current Organism:
Campylobacter lanienae
NCBI taxonomy Id: 75658
Other names: C. lanienae, CCUG 44467, CIP 106785, Campylobacter lanienae Logan et al. 2000, NCTC 13004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.