STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpAUnannotated protein. (342 aa)    
Predicted Functional Partners:
LldG
Unannotated protein.
   
    0.537
msrAB
Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.524
rplU
Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.513
tolB
Unannotated protein.
  
   0.494
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
       0.490
lutB
Unannotated protein.
   
    0.431
Your Current Organism:
Campylobacter lanienae
NCBI taxonomy Id: 75658
Other names: C. lanienae, CCUG 44467, CIP 106785, Campylobacter lanienae Logan et al. 2000, NCTC 13004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.