STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG98_320Hypothetical protein. (379 aa)    
Predicted Functional Partners:
rplP
LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.885
AKG98_3255
Protein YcgL.
  
     0.500
argS
Arginyl-tRNA synthetase.
   
    0.455
AKG98_639
Putative alpha helix protein; Belongs to the UPF0307 family.
  
     0.446
Your Current Organism:
Moritella sp. JT01
NCBI taxonomy Id: 756698
Other names: M. sp. JT01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.