STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG98_3778Tyrosine-specific transport protein. (412 aa)    
Predicted Functional Partners:
AKG98_2472
Transcriptional repressor protein TrpR.
  
   
 0.767
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
    
 0.692
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
     
 0.628
AKG98_3593
Chaperone protein DnaJ.
     
 0.628
AKG98_3552
O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.617
AKG98_3418
Hypothetical protein.
  
     0.612
AKG98_1097
RNA-binding domain protein; Belongs to the UPF0267 family.
  
     0.600
AKG98_3333
RNA-binding domain protein; Belongs to the UPF0267 family.
  
     0.590
AKG98_4241
Putative heat shock protein YegD.
  
 
  0.587
AKG98_1467
Protein yecM.
  
     0.566
Your Current Organism:
Moritella sp. JT01
NCBI taxonomy Id: 756698
Other names: M. sp. JT01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.