Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKG98_586Type IV fimbrial assembly protein PilC. (416 aa)    
Predicted Functional Partners:
AKG98_584
Type IV fimbrial assembly, ATPase PilB.
 
 
 0.972
AKG98_587
Leader peptidase (Prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.952
AKG98_1033
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.942
AKG98_656
MSHA biogenesis protein MshE.
 
 
 0.942
AKG98_552
Type IV pilus biogenesis protein PilM.
 
 
 
 0.852
AKG98_548
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.832
AKG98_507
Twitching motility protein PilT.
 
   
 0.813
AKG98_506
Twitching motility protein PilT.
 
   
 0.805
AKG98_1035
General secretion pathway protein G.
 
  
 0.762
AKG98_550
Type IV pilus biogenesis protein PilO.
 
 
 
 0.714
Your Current Organism:
Moritella sp. JT01
NCBI taxonomy Id: 756698
Other names: M. sp. JT01
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