Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN04512.1PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: hbo:Hbor_12910 deacylase. (340 aa)    
Predicted Functional Partners:
AEN04511.1
PFAM: Thioesterase superfamily; KEGG: hvo:HVO_1550 acyl-CoA thioester hydrolase.
       0.548
AEN07269.1
PFAM: ATP-grasp fold, RimK-type; KEGG: hla:Hlac_2369 RimK domain protein ATP-grasp.
 
     0.492
AEN05646.1
alpha-L-glutamate ligase, RimK family; KEGG: hvo:HVO_2813 hypothetical protein; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type; Protein of unknown function DUF785.
 
     0.489
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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