Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN04558.1KEGG: hvo:HVO_0721 hypothetical protein. (253 aa)    
Predicted Functional Partners:
AEN04559.1
KEGG: hla:Hlac_0933 hypothetical protein.
       0.853
AEN07022.1
PHP domain protein; PFAM: PHP, C-terminal; KEGG: htu:Htur_0776 PHP domain protein.
 
     0.572
AEN05258.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hbo:Hbor_34330 predicted DNA binding protein.
  
     0.570
AEN05815.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC3486 hypothetical protein.
  
     0.570
AEN06476.1
PFAM: DNA topoisomerase, type IA, zn finger; KEGG: hvo:HVO_2953 topoisomerase DNA binding C4 zinc finger.
  
     0.501
AEN05445.1
KEGG: hvo:HVO_2860 YcaO-like family domain-containing protein; TIGRFAM: biosynthesis docking scaffold protein, SagD family; YcaO-like; PFAM: YcaO-like.
  
     0.496
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
  
     0.469
AEN06042.1
PFAM: Protein of unknown function DUF1508; KEGG: hma:rrnAC1613 hypothetical protein.
  
     0.447
AEN06093.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.
  
     0.441
AEN06857.1
PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: hma:rrnAC1808 hypothetical protein.
 
     0.437
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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