Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN04562.1PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC2472 bacterio-opsin activator. (246 aa)    
Predicted Functional Partners:
AEN05258.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hbo:Hbor_34330 predicted DNA binding protein.
  
     0.629
AEN06982.1
PFAM: Abortive infection protein; KEGG: hje:HacjB3_14285 abortive infection protein.
  
     0.612
AEN04561.1
PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: hvo:HVO_1079 sulfate adenylyltransferase small subunit.
 
     0.598
AEN04860.1
PFAM: Kinetochore-Ndc80 complex, subunit Spc25; KEGG: nph:NP4262A rad50 ATPase.
  
     0.572
AEN06680.1
PFAM: Transcriptional regulator TrmB; KEGG: hbo:Hbor_02870 transcriptional regulator.
  
     0.572
AEN05694.1
KEGG: hma:pNG6077 hypothetical protein.
  
     0.566
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
  
     0.558
AEN07223.1
KEGG: hvo:HVO_0814 chaperone; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.549
AEN06225.1
KEGG: hbo:Hbor_20700 hypothetical protein.
  
     0.528
AEN06489.1
Peptidase A24B, FlaK domain protein; PFAM: Peptidase A24B, preflagellin, C-terminal; Peptidase A24A, prepilin type IV; KEGG: hla:Hlac_2136 peptidase A24A prepilin type IV.
  
     0.525
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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