STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN04579.1PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: hje:HacjB3_13795 succinyl-diaminopimelate desuccinylase. (395 aa)    
Predicted Functional Partners:
argG
PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: hbo:Hbor_01700 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.933
AEN05622.1
PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: hbo:Hbor_04460 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase.
  
  
 
0.929
AEN04671.1
PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: hla:Hlac_0829 peptidase M20.
  
  
 
0.927
lysK
N-acetyl-ornithine/N-acetyl-lysine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.
  
  
 
0.926
AEN04959.1
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: hbo:Hbor_01780 ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
    
 0.909
AEN06290.1
Arginase; TIGRFAM: Arginase, subgroup; KEGG: hla:Hlac_0934 arginase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
 
 0.903
AEN04582.1
KEGG: hla:Hlac_0669 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
  
 0.850
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.837
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
     
 0.816
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.816
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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