Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN04611.1PFAM: Ferritin/Dps protein; KEGG: hje:HacjB3_09550 ferritin Dps family protein; Belongs to the Dps family. (177 aa)    
Predicted Functional Partners:
AEN04612.1
PFAM: Ferritin/Dps protein; KEGG: htu:Htur_0172 ferritin Dps family protein.
 
    
0.785
AEN04613.1
PFAM: Ferritin/Dps protein; KEGG: htu:Htur_0173 ferritin Dps family protein.
 
    
0.784
dnaG
UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
     
  0.476
AEN04610.1
TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; KEGG: hla:Hlac_1182 methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic.
       0.416
AEN05365.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.410
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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