Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AEN04652.1KEGG: hbo:Hbor_24750 ribonuclease bn-like family. (383 aa)    
Predicted Functional Partners:
AEN04651.1
KEGG: hvo:HVO_0738 hypothetical protein.
       0.849
AEN06685.1
CopG-like domain-containing protein DNA-binding domain; PFAM: CopG-like DNA-binding; KEGG: nmg:Nmag_0981 putative transcriptional regulator, CopG/Arc/MetJ family.
      
 0.428
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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