STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN04666.1KEGG: hbo:Hbor_27950 geranylgeranyl reductase family protein; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: Monooxygenase, FAD-binding; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal. (362 aa)    
Predicted Functional Partners:
AEN04623.1
KEGG: hmu:Hmuk_3091 FAD dependent oxidoreductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase.
  
     0.710
AEN05479.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: hla:Hlac_1638 FAD dependent oxidoreductase.
  
     0.539
AEN05803.1
Phytoene synthase; KEGG: hwa:HQ2860A geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase); PFAM: Squalene/phytoene synthase.
 
  
 0.534
AEN06649.1
PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: hvo:HVO_0305 electron transfer flavoprotein subunit beta.
  
 
 0.521
AEN04667.1
KEGG: hbo:Hbor_27970 bnr/asp-box hypothetical protein.
       0.488
AEN05799.1
PFAM: UbiA prenyltransferase; KEGG: hla:Hlac_1898 prenyltransferase.
 
  
 0.478
AEN05093.1
KEGG: hla:Hlac_0706 NADH-ubiquinone oxidoreductase chain 49kDa; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit.
       0.471
AEN06650.1
PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: hbo:Hbor_28680 electron transfer flavoprotein, alpha subunit.
  
 
 0.463
AEN04669.1
KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like.
     
 0.457
AEN05798.1
KEGG: hla:Hlac_1897 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase.
 
  
 0.453
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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