Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN04668.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AEN04669.1
KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like.
       0.773
AEN04667.1
KEGG: hbo:Hbor_27970 bnr/asp-box hypothetical protein.
       0.636
AEN04670.1
PilT protein domain protein; KEGG: hvo:HVO_0421 P-loop ATPase of the PilT family; PFAM: PilT protein, N-terminal; K Homology, type 1, subgroup; SMART: Nucleotide binding protein, PINc; ATPase, AAA+ type, core.
       0.457
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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