Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN04679.1KEGG: hbo:Hbor_20880 hypothetical protein. (250 aa)    
Predicted Functional Partners:
AEN06018.1
PFAM: Type II secretion system protein E; KEGG: hvo:HVO_1160 type IV pilus biogenesis complex ATPase subunit.
       0.730
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
       0.730
AEN06020.1
Hypothetical protein; Manually curated; KEGG: hbo:Hbor_20830 hypothetical protein.
       0.730
AEN06021.1
Hypothetical protein; Manually curated; KEGG: hbo:Hbor_20840 hypothetical protein.
       0.730
AEN06022.1
KEGG: hvo:HVO_1156 hypothetical protein.
       0.730
AEN06023.1
KEGG: hbo:Hbor_20860 hypothetical protein.
       0.730
AEN04678.1
KEGG: hut:Huta_1582 hypothetical protein.
       0.461
AEN06024.1
Flagellin domain protein; TIGRFAM: Archaeal flagellin, N-terminal related; KEGG: hbo:Hbor_20870 hypothetical protein.
       0.423
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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