STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpXProtease htpX; KEGG: hwa:HQ3431A heat shock protein HtpX; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p; Belongs to the peptidase M48B family. (291 aa)    
Predicted Functional Partners:
AEN06813.1
PFAM: Auxin efflux carrier; KEGG: hbo:Hbor_25260 permease.
  
  
 0.669
AEN06182.1
PFAM: GHMP kinase; KEGG: hbo:Hbor_04760 kinase, sugar kinase superfamily.
  
    0.625
AEN04781.1
Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: hje:HacjB3_05970 fumarylacetoacetate (FAA) hydrolase.
  
  
 0.612
thrS
KEGG: hla:Hlac_1764 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
   0.563
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.563
AEN04780.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: hla:Hlac_2573 NAD-dependent epimerase/dehydratase.
 
     0.529
AEN06965.1
KEGG: hla:Hlac_0006 hypothetical protein.
 
     0.515
AEN05775.1
PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; Phosphoesterase, DHHA1; KEGG: hvo:HVO_2717 alanyl-tRNA synthetase.
  
    0.504
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
  
 0.491
AEN05638.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: hbo:Hbor_12870 succinate dehydrogenase subunit A; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal.
  
  
 0.481
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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