STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN04848.1KEGG: hvo:HVO_0624 maltose:maltodextrin transport system permease. (152 aa)    
Predicted Functional Partners:
AEN06446.1
PFAM: Methyltransferase type 11; KEGG: hut:Huta_1336 methyltransferase type 11.
 
     0.624
AEN04849.1
PFAM: Major facilitator superfamily MFS-1; KEGG: hla:Hlac_3544 major facilitator superfamily MFS_1.
 
     0.618
AEN06600.1
KEGG: hut:Huta_2747 hypothetical protein.
  
     0.583
AEN04983.1
PFAM: DNA helicase, UvrD/REP type; KEGG: hmu:Hmuk_3309 ATP-dependent exoDNAse (exonuclease V) beta subunit-like protein (contains helicase and exonuclease domains).
 
     0.536
leuS
TIGRFAM: Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic; KEGG: hbo:Hbor_27430 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.529
AEN05093.1
KEGG: hla:Hlac_0706 NADH-ubiquinone oxidoreductase chain 49kDa; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit.
       0.525
cysS
TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: hvo:HVO_1125 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR.
       0.461
AEN06218.1
TIGRFAM: Conserved hypothetical protein CHP03663; KEGG: hvo:HVO_1479 dolichyl-phosphate-mannose-proteinmannosyltransfe rase.
 
     0.461
AEN05058.1
PFAM: GtrA-like protein; KEGG: hvo:HVO_0705 GtrA-like family protein.
  
     0.444
rps9
KEGG: hwa:HQ2938A 30S ribosomal protein S9P; TIGRFAM: Ribosomal protein S9, archaeal; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
    0.425
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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