Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN04932.1PFAM: Helix-turn-helix, HxlR type; KEGG: hbo:Hbor_09860 transcriptional regulator. (118 aa)    
Predicted Functional Partners:
AEN04818.1
PFAM: Helix-turn-helix, HxlR type; KEGG: hla:Hlac_2995 transcriptional regulator, HxlR family.
  
     0.688
AEN04933.1
PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; KEGG: hut:Huta_1155 protein synthesis factor GTP-binding.
       0.536
AEN06191.1
PFAM: PemK-like protein; KEGG: nmg:Nmag_3399 transcriptional modulator of MazE/toxin, MazF.
   
    0.476
AEN05583.1
Phosphate uptake regulator, PhoU; PFAM: PhoU; Transcription regulator AbrB/SpoV, predicted; KEGG: hbo:Hbor_08050 phosphate uptake regulator.
   
  
 0.438
AEN04776.1
SMART: Helicase, ATP-dependent, c2 type; KEGG: hvo:HVO_0099 hypothetical protein.
      
 0.423
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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