STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05005.1KEGG: hmu:Hmuk_1053 hypothetical protein. (135 aa)    
Predicted Functional Partners:
AEN05006.1
KEGG: hmu:Hmuk_1054 hypothetical protein.
       0.793
AEN05004.1
KEGG: hmu:Hmuk_1052 hypothetical protein.
       0.773
AEN05003.1
Hypothetical protein.
       0.551
AEN04660.1
Nitrogen-fixing NifU domain-containing protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: hbo:Hbor_27860 thioredoxin-like protein.
      
 0.422
AEN04930.1
KEGG: hvo:HVO_1012 hypothetical protein.
      
 0.422
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.