STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05048.1Hypothetical protein. (42 aa)    
Predicted Functional Partners:
AEN05047.1
KEGG: hbo:Hbor_25200 hypothetical protein.
       0.625
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
       0.514
rps27e
KEGG: hvo:HVO_0700 30S ribosomal protein S27.eR; HAMAP: 30S ribosomal protein S27e; PFAM: Ribosomal protein S27e.
       0.514
AEN05045.1
PFAM: Eukaryotic translation initiation factor 2, alpha subunit; Ribosomal protein S1, RNA binding domain; KEGG: hbo:Hbor_25180 translation initiation factor 2 subunit alpha (aeif-2a).
       0.514
nop10
Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.
       0.514
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.