AEN05080.1 protein (halophilic archaeon DL31)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AEN05080.1

KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal. (411 aa)

Predicted Functional Partners:

AEN05079.1

0.559

AEN05169.1

0.534

AEN07098.1

0.529

AEN04797.1

0.528

AEN06615.1

0.528

AEN05802.1

0.519

AEN05889.1

0.518

AEN07071.1

0.501

AEN05886.1

0.476

AEN05078.1

0.446

Your Current Organism:

halophilic archaeon DL31

NCBI taxonomy Id: 756883
Other names: h. archaeon DL31

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEN04797.1	AEN05080.1	Halar_1034	Halar_1334	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.528
AEN04797.1	AEN05886.1	Halar_1034	Halar_2207	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.646
AEN05078.1	AEN05079.1	Halar_1332	Halar_1333	Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Bacterio-opsin activator, HTH; GAF; PAS fold-4; KEGG: hje:HacjB3_04505 putative PAS/PAC sensor protein; SMART: PAS.	KEGG: hje:HacjB3_18968 hypothetical protein.	0.486
AEN05078.1	AEN05080.1	Halar_1332	Halar_1334	Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Bacterio-opsin activator, HTH; GAF; PAS fold-4; KEGG: hje:HacjB3_04505 putative PAS/PAC sensor protein; SMART: PAS.	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.446
AEN05079.1	AEN05078.1	Halar_1333	Halar_1332	KEGG: hje:HacjB3_18968 hypothetical protein.	Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Bacterio-opsin activator, HTH; GAF; PAS fold-4; KEGG: hje:HacjB3_04505 putative PAS/PAC sensor protein; SMART: PAS.	0.486
AEN05079.1	AEN05080.1	Halar_1333	Halar_1334	KEGG: hje:HacjB3_18968 hypothetical protein.	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.559
AEN05080.1	AEN04797.1	Halar_1334	Halar_1034	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.528
AEN05080.1	AEN05078.1	Halar_1334	Halar_1332	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Bacterio-opsin activator, HTH; GAF; PAS fold-4; KEGG: hje:HacjB3_04505 putative PAS/PAC sensor protein; SMART: PAS.	0.446
AEN05080.1	AEN05079.1	Halar_1334	Halar_1333	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	KEGG: hje:HacjB3_18968 hypothetical protein.	0.559
AEN05080.1	AEN05169.1	Halar_1334	Halar_1432	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.534
AEN05080.1	AEN05802.1	Halar_1334	Halar_2119	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.519
AEN05080.1	AEN05886.1	Halar_1334	Halar_2207	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.476
AEN05080.1	AEN05889.1	Halar_1334	Halar_2212	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.518
AEN05080.1	AEN06615.1	Halar_1334	Halar_2988	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.528
AEN05080.1	AEN07071.1	Halar_1334	Halar_3475	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.	0.501
AEN05080.1	AEN07098.1	Halar_1334	Halar_3504	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.529
AEN05169.1	AEN05080.1	Halar_1432	Halar_1334	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.534
AEN05169.1	AEN05886.1	Halar_1432	Halar_2207	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.642
AEN05802.1	AEN05080.1	Halar_2119	Halar_1334	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.519
AEN05802.1	AEN05886.1	Halar_2119	Halar_2207	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.636