Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AEN05122.1TIGRFAM: CocE/NonD hydrolase; KEGG: hwa:HQ1933A X-Pro dipeptidyl-peptidase. (658 aa)    
Predicted Functional Partners:
AEN05121.1
PFAM: O-methyltransferase, family 3; KEGG: hbo:Hbor_18550 O-methyltransferase.
       0.580
AEN05120.1
KEGG: hje:HacjB3_10000 hypothetical protein.
       0.471
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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