STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05148.1KEGG: htu:Htur_1684 hypothetical protein. (209 aa)    
Predicted Functional Partners:
AEN05149.1
KEGG: htu:Htur_1683 hypothetical protein.
       0.782
AEN05815.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC3486 hypothetical protein.
  
     0.642
AEN06093.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.
  
     0.626
AEN07191.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.
  
     0.617
AEN07238.1
PFAM: GCN5-related N-acetyltransferase; KEGG: hbo:Hbor_09040 acetyltransferase (GNAT) family protein.
  
     0.541
AEN05586.1
PFAM: Protein of unknown function DUF2240; KEGG: hvo:HVO_2372 hypothetical protein.
  
     0.537
AEN06883.1
KEGG: hvo:HVO_0800 transcription regulator.
  
     0.524
AEN07092.1
PFAM: Transcriptional regulator TrmB; KEGG: hje:HacjB3_02945 transcription regulator.
  
     0.519
AEN05686.1
KEGG: hla:Hlac_2039 hypothetical protein.
  
     0.513
AEN05312.1
KEGG: hvo:HVO_1595 hypothetical protein.
  
     0.509
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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