Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN05167.1Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (142 aa)    
Predicted Functional Partners:
AEN06191.1
PFAM: PemK-like protein; KEGG: nmg:Nmag_3399 transcriptional modulator of MazE/toxin, MazF.
  
 
 0.896
AEN05166.1
Rieske (2Fe-2S) iron-sulfur domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: hvo:HVO_0920 rieske [2Fe-2S] domain containing oxidoreductase.
       0.534
AEN05593.1
KEGG: hbo:Hbor_11180 BirA, biotin-(acetyl-CoA-carboxylase) ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal.
     
 0.473
AEN06003.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: hvo:HVO_1398 putative sugar ABC transporter permease.
       0.434
AEN06078.1
KEGG: hbo:Hbor_10630 hypothetical protein.
     
 0.423
AEN06242.1
PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; KEGG: hvo:HVO_2502 hydrogenase expression/formation protein.
 
   
 0.404
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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